Synthetic biology in microalgae

Its mission:
Creating a micro-alga chassis for synthetic biology. Placing micro-algae among the key actors of the transition to bioeconomy.
Key words:
Genome editing- Metabolic engineering- Synthesis biology- Micro-algae
Person in charge:
Fayza Daboussi– Director of research INRA – fayza.daboussi@insa-toulouse.fr Team created in 2015
Team numbers in 2016: 6
Teachers and researchers: 1 Engineers: 1 Assistant engineers and technicians: 0 Post-doctoral and doctoral students: 4
Thematic axes:
- Axis 1: Developing methodologies for genome engineering
- Axis 2: Understanding the problem of genetic instability of strains subject to an industrialization process
- Axis 3: Re-constructing the lipid metabolism
- Axis 4: Producing new classes of carotenoids
- Axe 5: Deriving new metabolic pathways
Main activities:
- Optimizing the activity and specificity of genome engineering tools
- Regulating and controlling the expression of genes controlling an artificial metabolic pathway
- Increasing knowledge on cellular metabolism
- Developing and improving the metabolic potential of micro-algae for producing molecules of interest
Research models:
- Micro-algae: the diatom Phaeodactylum tricornutum
- Yeasts: Saccharomyces cerevisiae, Yarrowia lipolytica
Fields of application and target products:
Production of molecules of interest for the following sectors:
- energy (lipids)
- chemistry (fatty acids, biopolymers)
- health (pigments, proteins).
Technologies, techniques, specific tools:
- Targeted genetic modifications (CRISPR/Cas9, TALE nucleases, etc.)
- Tools and methodologies for modulating gene expression
- Metabolic engineering
Significant publications and patents:
- Daboussi F, Leduc S, Maréchal A, Dubois G, Guyot V, Perez-Michaut C, Amato A, Falciatore A, Juillerat A, Beurdeley M, Voytas DF, Cavarec L, Duchateau P. (2014) Genome engineering empowers the diatom Phaeodactylum tricornutum for biotechnology. Nat Commun. 29; 5: 3831.
- WO2014/076571A2: Method for targeted modification of algae genome. Duchateau P, Daboussi F.
- WO/2014/207043 Modified diatoms for biofuel production. Duchateau P, Daboussi F, Sourdive D & Epinat JC
TWB precompetitive projects:
- XANTHALG – Biosynthesis of xanthophylls: platform for therapeutic molecules
- CRISPY – CRISPR platform for the engineering of Yarrowia lipolytica